The path to the directory containing the data. File containing SBO IDs. File containing GO IDs. File containing EC numbers. File containing PubMed IDs. File containing PMC IDs. File containing SBO terms. File containing GO terms. Local database connection details. Local PubChem connection details. UMLS connection parameters. Configurable parameters. An Entrez query as a combination of keywords used to constrain the literature search. Weights used in a formula for scoring documents. Options to use when running KiPar. Which literature database to use: PubMed, PMC or both? Use documents selected by: automatic search (YES) or user (NO) Options to use when exporting the retrieved results. Export to HTML - yes/no? Export to bibtex - yes/no? Annotate full-text articles - yes/no? Use the specified tags to restrict exporting to the tag-matching documents only. A sequence of menu options to execute.